This page defines the filename and directory naming conventions used in lab repositories. These conventions apply to new repositories and new files. Existing repositories are not retroactively renamed unless there is a strong practical reason to do so.

• Use descriptive names.
• Use only lowercase letters (a-z), digits (0-9), hyphens (-), and underscores (_).
• Avoid spaces and other special characters.
• Use hyphens (-) by default.
• Use underscores (_) only for software source code files.

Documentation files, manuscripts, figures, tables, LaTeX macros, and other document-related files use hyphens to separate words.

Examples:

main.tex
cover-letter.tex
cover-letter.pdf
review-response.tex
response-macros.tex
fig-study-basin.tex
tab-algorithms.tex
software-availability.tex

Hyphens improve readability and match conventions commonly used in documentation, URLs, and open-source repositories.

Command-line interface (CLI) programs use hyphens in executable names because they are user-facing commands.

Examples:

flow-direction
longest-flow-path
mesh-builder

Workflow scripts are treated as command-line tools and therefore also use hyphens.

If the execution order matters, a numeric prefix may be used.

Examples:

1-download-files.sh
2-preprocess-files.sh
3-run-model.sh
4-postprocess-results.sh

Software source code files use underscores to separate words. This ensures compatibility with programming identifiers and module imports.

Examples:

flow_direction.py
longest_flow_path.py
mesh_builder.cpp
grid_utils.h

Directory names use hyphens, unless the directory represents a software package that must follow programming naming rules.

Examples:

submission-docs/
review-response/
fig-study-area/
build-scripts/

Generated files should normally keep the same base name as their source files.

Example:

cover-letter.tex → cover-letter.pdf